Training and Open Materials¶
I organize and teach microscopy and bioimage analysis training activities with a focus on practical skills, reproducible workflows, and open learning materials.
Courses and Training Events¶
ICOB Imaging Core Imaging Workshops¶
EABIAS Training Events¶
- Python and napari 2026
- Python for Bioimage Analysis - Watch Party & Discussion 2025
- ImageJ Macro Image Analysis and Programming 2025
Open-Access Training Materials¶
| Topic | Training context | Materials |
|---|---|---|
| 開源AI 生物影像分析影像分割工具選擇與應用Practal AI tools for Bioimage Segmentation. | ICOB Summer Bioimaging Workshop 2026. | Presentation Slides YouTube recording, Mandarin |
生物影像分析基礎--從 FIJI/ImageJ 操作到定量分析核心概念Bioimage Analysis with FIJI | ICOB Summer Bioimaging Workshop 2026. | Presentation Slides YouTube recording, Mandarin |
| 生物影像的第一堂課 (Imaging Core 新手包)Imaging Core Starter Kits | ICOB Summer Bioimaging Workshop 2026. | Presentation Slides YouTube recording, Mandarin |
| Practical AI Tools for Bioimage Segmentationilastik, Cellpose, and microSAM workflows. | EABIAS training 2026 event. | Presentation Slides YouTube recording, Mandarin |
| Bioimage Analysis with FIJI and AI Tools (ICOB)FIJI/ImageJ and AI-assisted analysis. | ICOB Summer Bioimaging Workshop 2025. | Presentation Slides YouTube recording, Mandarin |
| Bioimage Analysis with FIJI and AI Tools (TIGP-INS)FIJI/ImageJ and AI-assisted neuro-imaging analysis. | TIGP-INS Neuro-imaging Workshop 2025. | Presentation Slides YouTube recording, English |
| Interactive Bioimage Analysis Workflow with CLIJGPU-accelerated FIJI/ImageJ workflows. | EABIAS 2025 training event. | Presentation Slides YouTube recording, Mandarin |
| Introduction to Licensing for Documents and CodeReusable documents, code, and open sharing. | EABIAS 2025 training event. | Presentation Slides YouTube recording, Mandarin |
| Open-Source AI Tools for Bioimage AnalysisAI-assisted bioimage analysis tools. | ICOB Summer Bioimaging Workshop 2024. | Presentation Slides YouTube recording, Mandarin |
| Bioimage Analysis with FIJI/ImageJ and FriendsFIJI/ImageJ-centered practical analysis workflows. | ICOB Summer Bioimaging Workshop 2024. | Presentation Slides YouTube recording, Mandarin |
| Bioimage Analysis with FIJI/ImageJ WorkshopFoundational FIJI/ImageJ bioimage analysis. | ICOB Summer Bioimaging Workshop 2023. | Presentation Slides YouTube recording, Mandarin |
Continuing Professional Development¶
In-Person¶
- [Global BioImaging Train-the-Trainer 2025 Course], supported by the Global BioImaging Travel Grant
- GloBIAS Bioimage Analysis Training School 2025 Selected trainee; travel supported by ICOB, Academia Sinica, Taiwan. Award for the project presentation group work.
- PoL Bio-Image Analysis Training School 2023, Early Career Track Selected trainee; travel supported by ICOB, Academia Sinica, Taiwan.
- Bioimage Analysis Workshop 2023 at ICOB Python-based bioimage analysis workshop; trainee, assistant, and event organizer with Dr. Jung-Kun Wen.
Online¶
- Introduction to napari workshop 2026
- YMIA Python-Based Event Series 2024
- VMCF Bioimage Analysis and Data Processing Workshop 2024-2025
- BOMP Fundamentals of Fluorescence Microscopy 2024-2025
- LIBRE hub: Image data science with Python and napari 2023